Bioinformatics
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| The Colorado State University Center for Bioinformatics (CSUCB) provides bioinformatics services to RMRCE researchers. Faculty, post-doctoral students, graduate students, and staff researchers at RMRCE institutions may utilize CSUCB services, resources, and staff support. |
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| Services. CSUCB services include: |
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- Microarray Analysis
- Statistical Analysis
- Pathway Analysis
- Genomic and Proteomic Dataset Analysis
- Computer-Aided Drug Design
- Assistance using CSUCB computational resources
- Tightly integrated with RMRCE Genomics and Proteomics Core
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| Resources. CSUCB resources include: |
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- Apple G5 high-performance compute cluster (64-CPU's)
- HP Proliant database server
- Oracle bioinformatics database
- iNquiry Bioinformatics Portal
- 200+ Bioinformatics software applications
- Bioinformatics staff
- 8.5M+ virtual small-molecule compound library for high-throughput screening
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| Collaborations. |
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CSUCB manages a formal collaboration with the National Screening Laboratory for the Regional Centers of Excellence in Biodefense and Emerging Infectious Diseases (NSRB). The NSRB maintains small-molecule compound libraries for experimental high-throughput screens. CSUCB includes NSRB compounds in its virtual small-molecule compound library catalog. RMRCE researchers can run virtual screens at CSUCB using NSRB compounds, identify promising drug leads from the in-silico results, and then run experimental screens at NSRB with the most promising leads. |
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| Contact. For more information about CSUCB, setting up accounts, or assistance in using CSUCB resources, please contact: |
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